StrepDB - The Streptomyces Annotation Server
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CDS: SCO2812, SCBAC17F8.03
Gene:SCO2812
Pritag:CDS
Start:3070648
End:3071898
Strand:1
Note: SCO2812 CAC44275.1 SCBAC17F8.03 SCO2812 SCBAC17F8.03, possible drug efflux protein, len: 416aa: similar to many eg. TR:Q9LA76 (EMBL:AF148322) valanimycin-resistance protein from Streptomyces viridifaciens (402 aa) fasta scores; opt: 582, Z-score: 614.9, 32.405% identity (33.952% ungapped) in 395 aa overlap and TR:CAC41338 (EMBL:AJ307714) tertracycline resistance protein from Escherichia coli (398 aa) fasta scores; opt: 262, Z-score: 281.3, 28.056% identity (32.268% ungapped) in 360 aa overlap. Contains possible membrane-spanning hydrophobic regions.
Product:putative drug efflux protein
db_xref:GI:14799958, GOA:Q93J85, InterPro:IPR002453, InterPro:IPR005829, InterPro:IPR007114, InterPro:IPR011701, UniProtKB/TrEMBL:Q93J85
Conserved Domains
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Marchler-Bauer A et al (2007) CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35: D237-40